STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ASPRV1Aspartic peptidase retroviral like 1. (374 aa)    
Predicted Functional Partners:
CPNE6
Copine 6.
   
  
 0.740
NIPAL4
NIPA like domain containing 4.
   
  
 0.715
PNPLA1
Patatin like phospholipase domain containing 1.
      
 0.702
FCGBP
Uncharacterized protein.
      
 0.691
PKP1
Plakophilin 1.
   
  
 0.685
KLK13
Kallikrein related peptidase 13; Belongs to the peptidase S1 family.
      
 0.679
SLC4A7
Anion exchange protein.
      
 0.677
B4GALNT2
Beta-1,4-N-acetyl-galactosaminyltransferase 2.
      
 0.658
HOXC11
Homeobox C11.
      
 0.650
TGM1
Transglutaminase 1.
   
  
 0.599
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.