STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
ASPRV1Aspartic peptidase retroviral like 1. (374 aa)    
Predicted Functional Partners:
NIPAL4
NIPA like domain containing 4.
   
  
 0.839
PNPLA1
Patatin like phospholipase domain containing 1.
      
 0.820
SLC27A4
Solute carrier family 27 member 4.
      
 0.719
TGM1
Transglutaminase 1.
   
  
 0.716
CPNE6
Copine 6.
   
  
 0.689
SLC4A7
Anion exchange protein.
      
 0.687
KLK13
Kallikrein related peptidase 13; Belongs to the peptidase S1 family.
      
 0.687
FCGBP
Uncharacterized protein.
      
 0.649
PKP1
Plakophilin 1.
   
  
 0.644
HOXC11
Homeobox C11.
      
 0.631
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.