STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100068320Uncharacterized protein. (470 aa)    
Predicted Functional Partners:
TMEM120A-2
Serine/threonine/tyrosine interacting like 1.
    
 0.510
NUDT1
Nudix hydrolase 1; Belongs to the Nudix hydrolase family.
     
 0.488
CACTIN
Cactin, spliceosome C complex subunit.
    
 
 0.485
TRIM36
Tripartite motif containing 36.
      
 0.481
NIFK
Nucleolar protein interacting with the FHA domain of MKI67.
    
 
 0.477
NUDT10
Nudix hydrolase 10.
      
 0.471
NUDT11
Nudix hydrolase 11.
      
 0.471
KIFC1
Kinesin-like protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.420
ICOS
Inducible T cell costimulator.
   
 0.410
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.