Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXB3Homeobox B3. (421 aa)    
Predicted Functional Partners:
HOXB4
Homeobox B4.
   
  
0.862
SDHA
Succinate dehydrogenase [ubiquinone] flavoprotein subunit, mitochondrial; Flavoprotein (FP) subunit of succinate dehydrogenase (SDH) that is involved in complex II of the mitochondrial electron transport chain and is responsible for transferring electrons from succinate to ubiquinone (coenzyme Q).
    
   0.812
HOXB5
Homeobox B5.
   
  
0.750
HOXB7
Homeobox B7.
   
  
 0.727
HOXB6
Homeobox B6.
   
  
0.716
HOXD3
Homeobox D3.
   
  
 0.658
HOXB2
Homeobox B2.
   
  
0.640
HOXB8
Homeobox B8.
   
  
0.631
TTLL6
Tubulin tyrosine ligase like 6.
      
 0.530
KCTD11
Potassium channel tetramerization domain containing 11.
      
 0.529
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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