STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C11H17orf75Chromosome 11 C17orf75 homolog. (396 aa)    
Predicted Functional Partners:
FAM91A1
Family with sequence similarity 91 member A1.
   
 
 0.946
VPS25
Vacuolar protein sorting 25 homolog.
   
 0.929
SNF8
Vacuolar-sorting protein SNF8; Component of the endosomal sorting complex required for transport II (ESCRT-II), which is required for multivesicular body (MVB) formation and sorting of endosomal cargo proteins into MVBs. Belongs to the SNF8 family.
   
 0.892
VPS36
Vacuolar protein sorting 36 homolog.
   
 0.886
CHMP2A
Charged multivesicular body protein 2A.
   
 0.857
CHMP3
Uncharacterized protein.
    
 0.849
TBC1D23
TBC1 domain family member 23.
   
  
 0.847
VPS4B
Vacuolar protein sorting 4 homolog B; Belongs to the AAA ATPase family.
   
 0.819
VPS4A
Uncharacterized protein; Belongs to the AAA ATPase family.
    
 0.813
GLG1
Golgi glycoprotein 1.
      
 0.784
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.