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The next version of STRING is ready for use in your analyses: updated networks across STRING • newly available directed regulatory networks • a new typed view showing functional, physical, and regulatory edges in one network • new clustering options and cluster-based layouts • … and much more!
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STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIP6Thyroid hormone receptor interactor 6. (570 aa)    
Predicted Functional Partners:
ZNF358
Zinc finger protein 358.
    
 
 0.789
CCDC85B
Coiled-coil domain containing 85B.
      
 0.734
FBXL13
F-box and leucine rich repeat protein 13.
      
 0.697
HAUS3
HAUS augmin like complex subunit 3.
   
 0.680
HAUS1
HAUS augmin-like complex subunit 1-like protein.
   
 0.680
MIF4GD
MIF4G domain containing.
      
 0.654
HAUS8
HAUS augmin like complex subunit 8.
   
 0.644
FERMT2
Fermitin family member 2.
    
 0.632
STARD9
Uncharacterized protein; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Kinesin family.
   
 
 0.622
FLNA
Filamin A.
   
 0.614
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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