Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
HOXD12Homeobox D12. (270 aa)    
Predicted Functional Partners:
SALL1
Spalt like transcription factor 1.
    
 
 0.651
ZNF707
Uncharacterized protein.
    
 
 0.580
SBNO2
Strawberry notch homolog 2.
      
 0.572
IRX2
Iroquois homeobox 2.
    
 
 0.568
CBY2
Spermatid associated.
      
 0.566
SALL3
Spalt like transcription factor 3.
    
 
 0.556
IDH2
Isocitrate dehydrogenase [NADP]; Belongs to the isocitrate and isopropylmalate dehydrogenases family.
      
 0.548
GLIS3
GLIS family zinc finger 3.
    
 
 0.544
HAND2
Heart and neural crest derivatives expressed 2.
   
 
 0.532
EVX2
Even-skipped homeobox 2.
   
 
0.486
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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