STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
KCNF1Potassium voltage-gated channel modifier subfamily F member 1; Belongs to the potassium channel family. (494 aa)    
Predicted Functional Partners:
KCNAB3
Potassium voltage-gated channel subfamily A regulatory beta subunit 3.
   
 0.890
KCNH3
Potassium voltage-gated channel subfamily H member 3.
   
 
 0.783
NOL10
Nucleolar protein 10.
      
 0.775
SLC66A3
Solute carrier family 66 member 3.
      
 0.735
GABRA5
Gamma-aminobutyric acid type A receptor alpha5 subunit; Belongs to the ligand-gated ion channel (TC 1.A.9) family.
   
 
 0.722
KCNAB1
Potassium voltage-gated channel subfamily A member regulatory beta subunit 1.
   
 0.704
KCNAB2
Potassium voltage-gated channel subfamily A regulatory beta subunit 2.
   
 0.704
NTRK2
Tyrosine-protein kinase receptor.
   
 
 0.675
E2F6
E2F transcription factor 6.
      
 0.663
ATP6V1C2
V-type proton ATPase subunit C; Subunit of the peripheral V1 complex of vacuolar ATPase. Subunit C is necessary for the assembly of the catalytic sector of the enzyme and is likely to have a specific function in its catalytic activity. V-ATPase is responsible for acidifying a variety of intracellular compartments in eukaryotic cells.
   
  
 0.612
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.