STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PIRTPhosphoinositide interacting regulator of transient receptor potential channels. (138 aa)    
Predicted Functional Partners:
STARD10
StAR related lipid transfer domain containing 10.
      
 0.855
GOLGA1
Golgin A1.
      
 0.770
MAPK8IP1
Mitogen-activated protein kinase 8 interacting protein 1.
      
 0.763
GOLGA2
Uncharacterized protein.
      
 0.695
NRDE2
NRDE-2, necessary for RNA interference, domain containing.
      
 0.600
WIPI2
WD repeat domain, phosphoinositide interacting 2.
      
 0.540
PHF24
PHD finger protein 24.
   
  
 0.485
VPS18
VPS18 core subunit of CORVET and HOPS complexes.
      
 0.482
CAMK1G
Calcium/calmodulin dependent protein kinase IG; Belongs to the protein kinase superfamily.
      
 0.480
TRPM8
Transient receptor potential cation channel subfamily M member 8.
   
  
 0.480
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.