STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
POGKPogo transposable element derived with KRAB domain. (608 aa)    
Predicted Functional Partners:
TIGD3
Tigger transposable element derived 3.
   
  
 0.912
JRKL
JRK like.
      
 0.910
TIGD2
Tigger transposable element derived 2.
      
 0.910
CENPBD1
Uncharacterized protein.
      
 0.908
TIGD5
Tigger transposable element derived 5.
      
 0.908
TIGD7
Tigger transposable element derived 7.
   
  
 0.907
LRRC52
Leucine rich repeat containing 52.
      
 0.852
UCK2
Uridine-cytidine kinase; Belongs to the uridine kinase family.
    
 
 0.843
NAIF1
Nuclear apoptosis inducing factor 1.
   
  
 0.812
MRPL30
Ribosomal_L30 domain-containing protein.
      
 0.730
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.