STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A8Solute carrier family 38 member 8. (435 aa)    
Predicted Functional Partners:
ZBTB43
Zinc finger and BTB domain containing 43.
    
 0.802
NECAB2
N-terminal EF-hand calcium binding protein 2.
    
 0.773
PDE7B
Phosphodiesterase.
      
 0.746
ASCC3
Activating signal cointegrator 1 complex subunit 3.
      
 0.696
GRM8
Glutamate metabotropic receptor 8.
      
 0.674
PDSS2
Decaprenyl diphosphate synthase subunit 2; Belongs to the FPP/GGPP synthase family.
      
 0.672
CAMK2D
Calcium/calmodulin dependent protein kinase II delta.
      
 0.647
NT5C1A
5'-nucleotidase, cytosolic IA.
   
  
 0.597
SLC4A5
Anion exchange protein.
      
 0.574
TRIT1
tRNA isopentenyltransferase 1; Belongs to the IPP transferase family.
      
 0.561
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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