STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
F6XTF5_HORSEUncharacterized protein. (541 aa)    
Predicted Functional Partners:
ENSECAP00000041377
Uncharacterized protein.
   
 0.680
IFT20
Intraflagellar transport 20.
   
 0.680
SEC24B
SEC24 homolog B, COPII coat complex component.
   
 0.489
NHS
NHS actin remodeling regulator.
   
 0.486
MIB1
Mindbomb E3 ubiquitin protein ligase 1.
    
 0.464
USO1
USO1 vesicle transport factor.
   
 0.460
RAB11B
RAB11B, member RAS oncogene family.
   
 0.436
RAB11A
RAB11A, member RAS oncogene family.
   
 0.436
GOLGA2
Uncharacterized protein.
   
 
 0.417
MYO5B
Myosin VB; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
   
 0.417
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.