STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FOXB1Forkhead box B1. (325 aa)    
Predicted Functional Partners:
SOX5
SRY-box 5.
      
 0.792
SHOX
Short stature homeobox.
   
  
 0.738
PRDM16
PR/SET domain 16.
      
 0.685
SOX11
Transcription factor SOX.
   
  
 0.612
IRX1
Iroquois homeobox 1.
      
 0.582
CFAP36
Cilia and flagella associated protein 36.
      
 0.572
IRX2
Iroquois homeobox 2.
      
 0.565
FAM81B
Family with sequence similarity 81 member B.
      
 0.565
BUB3
BUB3 mitotic checkpoint protein.
      
 0.561
HOMEZ
Homeobox and leucine zipper encoding.
      
 0.552
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.