STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
FRG1FSHD region gene 1. (257 aa)    
Predicted Functional Partners:
CWC22
CWC22 spliceosome associated protein homolog.
   
   0.923
GBF1
Golgi brefeldin A resistant guanine nucleotide exchange factor 1.
 
      0.818
PRPF8
Pre-mRNA processing factor 8.
    
 
 0.798
TRIML1
Tripartite motif family like 1.
   
 
 0.762
TRIML2
Tripartite motif family like 2.
    
 
 0.688
WFDC3
Uncharacterized protein.
      
 0.651
SNRPF
Small nuclear ribonucleoprotein polypeptide F.
    
 
 0.648
BCAS2
BCAS2 pre-mRNA processing factor.
   
 
 0.634
CWC15
CWC15 spliceosome associated protein homolog.
   
 
 0.632
RBM8A
RNA-binding protein 8A; Core component of the splicing-dependent multiprotein exon junction complex (EJC) deposited at splice junctions on mRNAs.
   
   0.631
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.