STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PNMA1PNMA family member 1. (353 aa)    
Predicted Functional Partners:
FANCM
FA complementation group M.
    
 0.725
ZNF202
Zinc finger protein 202.
   
 0.526
ZNF197
Zinc finger protein 197.
   
 0.525
ZNF274
Uncharacterized protein.
   
 0.524
ZIC4
Zic family member 4.
    
 0.515
DNER
Delta/notch like EGF repeat containing.
   
 0.489
PADI3
Peptidyl arginine deiminase 4.
      
 0.483
LGI1
Leucine rich glioma inactivated 1.
   
  
 0.481
ARHGAP26
Rho GTPase activating protein 26.
    
 
 0.472
HOMER3
Homer scaffold protein 3.
   
 
 0.449
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.