STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PRDM6PR/SET domain 6. (595 aa)    
Predicted Functional Partners:
PIGY
Phosphatidylinositol N-acetylglucosaminyltransferase subunit Y-like protein.
      
 0.797
KMT5C
Lysine methyltransferase 5C.
      
 0.718
PLOD2
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 2.
     
 0.714
PRDM14
PR/SET domain 14.
   
 
0.664
CAMKMT
Calmodulin-lysine N-methyltransferase.
     
 0.655
PLOD3
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 3.
     
  0.650
PLOD1
Procollagen-lysine,2-oxoglutarate 5-dioxygenase 1.
     
  0.650
CBFA2T2
CBFA2/RUNX1 partner transcriptional co-repressor 2.
    
 
 0.544
SMYD2
SET and MYND domain containing 2.
    
 0.499
ZBED6
Zinc finger BED-type containing 6.
    
 
 0.486
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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