Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene fusion
Co-occurrence
Co-expression
Experiments
Databases
Textmining
[Homology]
Score
TMEM35ATransmembrane protein 35A. (175 aa)    
Predicted Functional Partners:
SASS6
SAS-6 centriolar assembly protein.
    
   0.784
H2BC21
Histone H2B type 2-E.
      
 0.772
RIC3
RIC3 acetylcholine receptor chaperone.
     
 0.697
APMAP
Adipocyte plasma membrane associated protein.
    
 
 0.689
NIBAN3
Niban apoptosis regulator 3.
     
 0.642
CENPJ
Centromere protein J.
    
   0.610
TCP10L2
Tcp10_C domain-containing protein.
    
   0.610
FAM110D
Family with sequence similarity 110 member D.
      
 0.546
SMTNL2
Smoothelin like 2.
      
 0.546
H2AZ1
Histone H2A; Belongs to the histone H2A family.
   
  
 0.527
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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