STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LAMB4Laminin subunit beta 4. (1747 aa)    
Predicted Functional Partners:
ITGA11
Integrin subunit alpha 11; Belongs to the integrin alpha chain family.
   
 
 0.707
ITGA2
Integrin subunit alpha 2; Belongs to the integrin alpha chain family.
   
 
 0.702
ITGA10
Integrin subunit alpha 10; Belongs to the integrin alpha chain family.
   
 
 0.702
PELO
Integrin subunit alpha 1; Belongs to the integrin alpha chain family.
   
 
 0.700
ITGA8
Integrin subunit alpha 8; Belongs to the integrin alpha chain family.
   
 
 0.691
BCORL1
BCL6 corepressor like 1.
      
 0.690
ITGA9
Integrin subunit alpha 9; Belongs to the integrin alpha chain family.
   
 
 0.687
LAMB3
Laminin subunit beta 3.
   
 
0.686
SGCA
Integrin subunit alpha 3; Belongs to the integrin alpha chain family.
     
 0.666
LAMA5
Laminin subunit alpha 5.
    
0.659
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.