STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCFD1Sec1 family domain containing 1; Belongs to the STXBP/unc-18/SEC1 family. (641 aa)    
Predicted Functional Partners:
BET1
BET1-like protein-like protein.
   
 0.997
GOSR2
Uncharacterized protein; Involved in transport of proteins from the cis/medial-Golgi to the trans-Golgi network.
    
 0.996
STX5
Syntaxin 5; Belongs to the syntaxin family.
    
 0.991
YKT6
YKT6 v-SNARE homolog; Belongs to the synaptobrevin family.
   
 0.985
GOSR1
Golgi SNAP receptor complex member 1; Involved in transport from the ER to the Golgi apparatus as well as in intra-Golgi transport. It belongs to a super-family of proteins called t-SNAREs or soluble NSF (N-ethylmaleimide-sensitive factor) attachment protein receptor.
    
 
 0.975
SEC22B
SEC22 homolog B, vesicle trafficking protein; Belongs to the synaptobrevin family.
   
 0.974
NSF
N-ethylmaleimide sensitive factor, vesicle fusing ATPase.
   
 0.914
BET1L
Bet1 golgi vesicular membrane trafficking protein like.
   
 0.912
NAPA
NSF attachment protein alpha.
    
 0.911
NAPB
NSF attachment protein beta.
    
 0.911
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: medium (42%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.