STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LHX8LIM homeobox 8. (375 aa)    
Predicted Functional Partners:
FIGLA
Folliculogenesis specific bHLH transcription factor.
   
 0.922
NOBOX
NOBOX oogenesis homeobox.
      
 0.866
SOHLH1
Spermatogenesis and oogenesis specific basic helix-loop-helix 1.
      
 0.749
GBX1
Gastrulation brain homeobox 1.
   
 
 0.736
SOHLH2
BHLH domain-containing protein.
      
 0.675
SOX6
SRY-box 6.
   
 
 0.645
POLR3H
RNA polymerase III subunit H.
      
 0.642
LDB1
LIM domain binding 1.
    
 0.640
GDF9
Growth differentiation factor 9.
    
 
 0.625
DLX1
Distal-less homeobox 1.
   
  
 0.596
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (20%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.