STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FAM118BFamily with sequence similarity 118 member B. (351 aa)    
Predicted Functional Partners:
C11orf95
Chromosome 11 open reading frame 95.
   
 0.935
MAMLD1
Mastermind like domain containing 1.
    
 0.819
INTS4
Integrator complex subunit 4.
    
 
 0.710
MAML2
Mastermind like transcriptional coactivator 2.
   
 0.541
MAML3
Mastermind like transcriptional coactivator 3.
   
 0.539
MAML1
Mastermind like transcriptional coactivator 1.
   
 0.518
NUTM1
NUT midline carcinoma family member 1.
    
 0.510
SS18
SS18 subunit of BAF chromatin remodeling complex.
   
 
 0.502
PYGO1
Pygopus family PHD finger 1.
    
 0.486
LOC100067436
Aquaporin; Aquaporins facilitate the transport of water and small neutral solutes across cell membranes.
      
 0.480
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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