STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLC38A6Solute carrier family 38 member 6. (456 aa)    
Predicted Functional Partners:
SLC35C2
Solute carrier family 35 member C2.
   
  
 0.912
SLC41A2
Solute carrier family 41 member 2.
      
 0.800
SLC52A3
Solute carrier family 52 member 3.
   
  
 0.797
SLC12A5
Solute carrier family 12 member 5.
   
 
 0.698
ATP10D
Phospholipid-transporting ATPase; Belongs to the cation transport ATPase (P-type) (TC 3.A.3) family. Type IV subfamily.
    
 
 0.673
TMEM241
Transmembrane protein 241.
      
 0.671
LUC7L
LUC7 like.
      
 0.657
SLC24A5
Uncharacterized protein; Belongs to the Ca(2+):cation antiporter (CaCA) (TC 2.A.19) family.
   
  
 0.653
NOCT
Nocturnin.
   
  
 0.601
RAB3GAP1
RAB3 GTPase activating protein catalytic subunit 1.
   
    0.599
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.