STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
C5AR1Complement C5a receptor 1; Belongs to the G-protein coupled receptor 1 family. (374 aa)    
Predicted Functional Partners:
C5
Complement C5.
    
 0.994
RPS19
Ribosomal protein S19.
   
  
 0.607
GPR84
G protein-coupled receptor 84.
   
 
 0.578
LOC100059239
Uncharacterized protein.
    
 0.551
PTGER3
Prostaglandin E receptor 3.
      
 0.521
APOBEC3Z1B
CMP/dCMP-type deaminase domain-containing protein.
      
 0.516
C1QC
Complement C1q C chain.
   
  
 0.505
CLEC1B
C-type lectin domain family 1 member B.
   
  
 0.492
PKHD1L1
PKHD1 like 1.
     
 0.486
IGSF6
Immunoglobulin superfamily member 6.
   
  
 0.479
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.