STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC100146589Uncharacterized protein. (205 aa)    
Predicted Functional Partners:
NSL1
NSL1 component of MIS12 kinetochore complex.
   
 0.979
MIS12
MIS12 kinetochore complex component.
   
 0.974
PMFBP1
Polyamine modulated factor 1 binding protein 1.
      
 0.855
NKX6-3
NK6 homeobox 3.
      
 0.852
SPC24
SPC24 component of NDC80 kinetochore complex.
   
 0.851
NUF2
NUF2 component of NDC80 kinetochore complex.
   
 0.833
ZWINT
ZW10 interacting kinetochore protein.
   
 
 0.766
SPC25
SPC25 component of NDC80 kinetochore complex.
   
  0.713
NDC80
NDC80 kinetochore complex component.
   
 0.710
POU6F1
POU domain protein.
      
 0.691
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.