STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PACS1Phosphofurin acidic cluster sorting protein 1. (961 aa)    
Predicted Functional Partners:
WDR37
WD repeat domain 37.
    
 
 0.809
SNX18
Sorting nexin.
   
  
 0.699
PKD2
Polycystin 2, transient receptor potential cation channel.
      
 0.699
CPD
Carboxypeptidase D.
   
  
 0.691
TANC2
Tetratricopeptide repeat, ankyrin repeat and coiled-coil containing 2.
   
  
 0.624
FURIN
Furin, paired basic amino acid cleaving enzyme; Belongs to the peptidase S8 family.
    
 
 0.595
PCSK4
Uncharacterized protein.
    
 
 0.595
DLGAP2
DLG associated protein 2.
   
  
 0.575
SORT1
Sortilin.
    
 
 0.551
IPO9
Importin 9.
   
  
 0.504
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.