STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
MYRIPMyosin VIIA and Rab interacting protein. (859 aa)    
Predicted Functional Partners:
SYTL1
Synaptotagmin like 1.
      
 0.902
RAB27A
RAB27A, member RAS oncogene family.
    
 0.893
MYO5A
Myosin VA; Belongs to the TRAFAC class myosin-kinesin ATPase superfamily. Myosin family.
     
 0.808
RAB27B
RAB27B, member RAS oncogene family.
    
 0.789
LOC100064042
Uncharacterized protein.
   
  
 0.700
RABEPK
Rab9 effector protein with kelch motifs.
      
 0.698
GMIP
GEM interacting protein.
      
 0.653
EXOC3
Exocyst complex component 3.
     
 0.592
EXOC4
Exocyst complex component 4.
     
 0.591
STXBP5
Syntaxin binding protein 5.
      
 0.578
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.