STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111767887Myelin expression factor 2. (600 aa)    
Predicted Functional Partners:
POLR2K
RNA polymerase II subunit K.
   
 0.931
LSM5
U6 snRNA-associated Sm-like protein LSm5; Plays a role in U6 snRNP assembly and function. Binds to the 3' end of U6 snRNA.
   
 
 0.868
ZRSR2
Zinc finger CCCH-type, RNA binding motif and serine/arginine rich 2.
   
 0.745
XAB2
XPA binding protein 2.
   
 0.695
CRNKL1
Crooked neck pre-mRNA splicing factor 1.
   
 0.682
ISY1
Uncharacterized protein.
   
 0.679
LUC7L3
LUC7 like 3 pre-mRNA splicing factor.
   
 
 0.671
LOC100071364
Uncharacterized protein.
   
 0.658
LOC100071373
Uncharacterized protein.
    
 0.655
LOC111772322
G_PROTEIN_RECEP_F1_2 domain-containing protein; Belongs to the G-protein coupled receptor 1 family.
      
 0.635
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.