STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
ZCCHC7Zinc finger CCHC-type containing 7. (547 aa)    
Predicted Functional Partners:
MTREX
Mtr4 exosome RNA helicase.
   
 0.922
TENT4B
Terminal nucleotidyltransferase 4B.
   
 0.912
TENT4A
Terminal nucleotidyltransferase 4A.
   
 0.890
ZCCHC8
Zinc finger CCHC-type containing 8.
     
 0.760
ZFC3H1
Zinc finger C3H1-type containing.
   
  
 0.724
RBM7
RRM domain-containing protein.
   
  
 0.719
WAC
WW domain containing adaptor with coiled-coil.
   
 
 0.640
BEND4
BEN domain containing 4.
      
 0.634
PAX5
Paired box 5.
   
  
 0.620
DDX31
DEAD-box helicase 31; Belongs to the DEAD box helicase family.
   
 
 0.582
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.