STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SLCO6A1Solute carrier organic anion transporter family member. (701 aa)    
Predicted Functional Partners:
RTL4
Retrotransposon Gag like 4.
   
  
 0.723
LRRK1
Leucine rich repeat kinase 1.
      
 0.566
SLC22A11
Solute carrier family 22 member 11.
   
  
 0.559
RBP7
Retinol binding protein 7; Belongs to the calycin superfamily. Fatty-acid binding protein (FABP) family.
   
  
 0.556
SLCO1B3
Solute carrier organic anion transporter family member.
  
 
0.525
CATSPERE
Catsper channel auxiliary subunit epsilon.
   
   0.522
SLC2A1
Solute carrier family 2 member 1; Belongs to the major facilitator superfamily. Sugar transporter (TC 2.A.1.1) family.
    
 
 0.519
LHFPL1
LHFPL tetraspan subfamily member 1.
   
  
 0.498
UBE4B
Ubiquitination factor E4B.
      
 0.489
SLC22A6
Solute carrier family 22 member 6.
   
  
 0.486
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.