STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Knowledge-based Evidence
from curated databases
textmining
Assay-based Predictions
experimentally determined
co-expression
Genomic Predictions
gene neighborhood
gene co-occurrence
gene fusions
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
GORABGolgin, RAB6 interacting. (372 aa)    
Predicted Functional Partners:
RCHY1
Ring finger and CHY zinc finger domain containing 1.
    
 
 0.866
SCYL1
SCY1 like pseudokinase 1.
   
 
 0.848
SCYL3
SCY1 like pseudokinase 3.
   
 
 0.616
DARS2
Aspartyl-tRNA synthetase 2, mitochondrial.
      
 0.541
FTCD
Formimidoyltransferase cyclodeaminase.
      
 0.516
SUCNR1
Succinate receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.466
TDRD7
Tudor domain containing 7.
      
 0.453
PSKH1
Protein serine kinase H1; Belongs to the protein kinase superfamily.
      
 0.447
HEATR3
HEAT repeat containing 3.
      
 0.446
STRN4
Striatin 4.
      
 0.444
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.