STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FBXL13F-box and leucine rich repeat protein 13. (734 aa)    
Predicted Functional Partners:
TSPAN10
Tetraspanin.
   
    0.797
SKP1
S-phase kinase associated protein 1; Belongs to the SKP1 family.
   
 0.787
CRY2
Cryptochrome circadian regulator 2.
    
 0.757
SH3KBP1
SH3 domain containing kinase binding protein 1.
    
 
 0.722
CUL1
Cullin 1; Belongs to the cullin family.
    
 0.720
TRIP6
Thyroid hormone receptor interactor 6.
      
 0.697
FAM185A
Family with sequence similarity 185 member A.
      
 0.673
CUL3
Cullin 3; Belongs to the cullin family.
    
 0.673
RBX1
Ring-box 1.
    
 0.650
NOL4
Nucleolar protein 4.
   
  
 0.601
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.