STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PTGDRProstaglandin D2 receptor. (293 aa)    
Predicted Functional Partners:
ZNF41
Zinc finger protein 41.
      
 0.720
CNOT7
CCR4-NOT transcription complex subunit 7.
   
  
 0.676
RXRB
Retinoid X receptor beta.
     
 0.675
PCYOX1
Prenylcysteine oxidase 1.
      
 0.665
MTRF1L
Mitochondrial translational release factor 1 like.
      
 0.650
TRPC4AP
Transient receptor potential cation channel subfamily C member 4 associated protein.
      
 0.650
ARHGAP25
Rho GTPase activating protein 25.
   
  
 0.636
ZNF780A
Uncharacterized protein.
      
 0.631
AGTRAP
Dorsal inhibitory axon guidance protein.
    
 
 0.605
LTA4H
Leukotriene A(4) hydrolase; Belongs to the peptidase M1 family.
      
 0.562
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (22%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.