STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRIM59Tripartite motif containing 59. (323 aa)    
Predicted Functional Partners:
TRIM44
Tripartite motif containing 44.
    
 
 0.908
IFT80
Intraflagellar transport 80.
 
 
 
 0.829
TRIM37
Tripartite motif containing 37.
   
 
 0.708
ECSIT
ECSIT signalling integrator.
   
 
 0.644
SMC4
Structural maintenance of chromosomes protein.
   
 
 0.615
TRIM33
Tripartite motif containing 33.
   
 
 0.600
ARL14
ADP ribosylation factor like GTPase 14; Belongs to the small GTPase superfamily. Arf family.
    
 0.598
PPM1L
Protein phosphatase, Mg2+/Mn2+ dependent 1L.
    
 0.590
RNF150
Ring finger protein 150.
     
 0.579
RNF145
Ring finger protein 145.
   
 
 0.573
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.