STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SHKBP1SH3KBP1 binding protein 1. (739 aa)    
Predicted Functional Partners:
PACRGL
Parkin coregulated like.
      
 0.697
BTBD10
BTB domain containing 10.
   
  
 0.666
SOX13
SRY-box 13.
      
 0.655
HIP1R
Huntingtin interacting protein 1 related.
   
  
 0.653
KCTD19
Potassium channel tetramerization domain containing 19.
    
 
 0.644
RANGAP1
Ran GTPase activating protein 1.
   
  
 0.584
LRRC23
Leucine rich repeat containing 23.
   
 
 0.516
KCTD1
BTB domain-containing protein.
    
 
0.510
TTBK2
Tau tubulin kinase 2.
      
 0.481
MACC1
MET transcriptional regulator MACC1.
      
 0.478
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.