STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
PAPLNPapilin, proteoglycan like sulfated glycoprotein. (1380 aa)    
Predicted Functional Partners:
R3HCC1
R3H domain and coiled-coil containing 1.
      
 0.796
MOCS1
Molybdenum cofactor synthesis 1.
    
 
 0.739
PRPF3
Pre-mRNA processing factor 3.
   
  
 0.697
USP4
Ubiquitin carboxyl-terminal hydrolase; Deubiquitinating enzyme that removes conjugated ubiquitin from specific proteins to regulate different cellular processes. Belongs to the peptidase C19 family.
      
 0.636
JMJD1C
Jumonji domain containing 1C.
   
  
 0.587
FAM78B
Family with sequence similarity 78 member B.
    
 0.583
FAM78A
Family with sequence similarity 78 member A.
    
 0.583
WIPF1
WAS/WASL interacting protein family member 1.
   
  
 0.566
PTGDR
Prostaglandin D2 receptor.
    
 0.557
TMEM247
Transmembrane protein 247.
      
 0.533
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.