STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
IQCF1IQ motif containing F1. (207 aa)    
Predicted Functional Partners:
HMGB4
High mobility group box 4.
   
 
 0.903
CCDC181
Coiled-coil domain containing 181.
   
  
 0.903
RASSF3
Ras association domain family member 3.
      
 0.901
ANKRD9
Uncharacterized protein.
      
 0.900
ZNF706
Zinc finger protein 706.
      
 0.791
RPL37
Ribosomal protein L37; Binds to the 23S rRNA.
      
 0.770
TSSK6
Testis specific serine kinase 6; Belongs to the protein kinase superfamily.
      
 0.711
DNAJC2
DnaJ heat shock protein family (Hsp40) member C2.
      
 0.692
TNP1
Transition protein 1.
   
  
 0.672
RPS28
Ribosomal protein S28.
      
 0.652
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.