STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
BUD13BUD13 homolog. (703 aa)    
Predicted Functional Partners:
SNIP1
Smad nuclear interacting protein 1.
   
 0.999
RBMX2
Solute carrier family 25 member 14; Belongs to the mitochondrial carrier (TC 2.A.29) family.
   
 0.999
PRPF19
Pre-mRNA processing factor 19.
    
 
 0.979
CDC5L
Cell division cycle 5 like.
   
 
 0.976
MFAP1
Microfibrillar-associated protein 1-like protein.
   
  0.976
PHF5A
PHD finger-like domain-containing protein 5-like protein.
    
 0.975
DHX16
DEAH-box helicase 16.
   
 0.971
SF3B2
Splicing factor 3b subunit 2.
   
 0.968
SF3A2
Splicing factor 3a subunit 2.
    
 0.968
CWC22
CWC22 spliceosome associated protein homolog.
   
 0.949
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.