STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NCDNNeurochondrin. (729 aa)    
Predicted Functional Partners:
TBC1D22A
TBC1 domain family member 22A.
      
 0.798
PTH2R
Parathyroid hormone 2 receptor; Belongs to the G-protein coupled receptor 2 family.
      
 0.770
CALN1
Calneuron 1.
   
  
 0.696
FBXO25
F-box protein 25.
   
 
 0.692
NPBWR1
Neuropeptides B and W receptor 1; Belongs to the G-protein coupled receptor 1 family.
      
 0.673
AAR2
AAR2 splicing factor.
    
 
 0.666
AOAH
Acyloxyacyl hydrolase.
      
 0.634
TTC27
Tetratricopeptide repeat domain 27.
    
 
 0.597
ZNHIT2
Zinc finger HIT-type containing 2.
    
 
 0.588
COL24A1
Collagen type XXIV alpha 1 chain.
   
  
 0.571
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.