STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
RNF25Ring finger protein 25. (459 aa)    
Predicted Functional Partners:
ZNF319
Zinc finger protein 319.
      
 0.736
RNF149
RING-type domain-containing protein.
      
 0.736
PSMA6
Proteasome subunit alpha type.
   
  
 0.699
LSM7
LSM7 homolog, U6 small nuclear RNA and mRNA degradation associated.
      
 0.696
UBA2
SUMO-activating enzyme subunit 2; The heterodimer acts as an E1 ligase for SUMO1, SUMO2, SUMO3, and probably SUMO4. It mediates ATP-dependent activation of SUMO proteins followed by formation of a thioester bond between a SUMO protein and a conserved active site cysteine residue on UBA2/SAE2. Belongs to the ubiquitin-activating E1 family.
     
 0.675
ZNF207
Zinc finger protein 207.
   
  
 0.674
RNF11
Ring finger protein 11.
      
 0.673
RNF181
Ring finger protein 181.
   
  
 0.646
RNF19A
RBR-type E3 ubiquitin transferase.
      
 0.636
JOSD1
Josephin domain containing 1.
   
  
 0.636
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.