STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
FIGNL1Fidgetin like 1; Belongs to the AAA ATPase family. (677 aa)    
Predicted Functional Partners:
UBXN7
UBX domain protein 7.
   
 0.916
SPATA48
Spermatogenesis associated 48.
   
  
 0.905
PDZD3
PDZ domain containing 3.
     
 0.886
THSD7A
Thrombospondin type 1 domain containing 7A.
      
 0.858
SWSAP1
SWIM-type zinc finger 7 associated protein 1.
    
 
 0.828
WDR76
WD repeat domain 76.
   
 
 0.789
NAPG
NSF attachment protein gamma.
   
 0.769
NEMP1
Nuclear envelope integral membrane protein 1.
   
 
 0.733
CCDC77
Coiled-coil domain containing 77.
   
 
 0.722
SPIDR
Scaffold protein involved in DNA repair.
    
 
 0.722
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.