Export your current network:
... as a bitmap image:
file format is 'PNG': portable network graphic
... as a high-resolution bitmap:
same PNG format, but at higher resolution
... as a vector graphic:
SVG: scalable vector graphic - can be opened and edited in Illustrator, CorelDraw, Dia, etc
... as short tabular text output:
TSV: tab separated values - can be opened in Excel and Cytoscape (lists only one-way edges: A-B)
... as tabular text output:
TSV: tab separated values - can be opened in Excel (lists reciprocal edges: A-B,B-A)
... as an XML summary:
structured XML interaction data, according to the 'PSI-MI' data standard
... protein node degrees:
node degree of proteins in your network (given the current score cut-off)
... network coordinates:
a flat-file format describing the coordinates and colors of nodes in the network
... protein sequences:
MFA: multi-fasta format - containing the aminoacid sequences in the network
... protein annotations:
a tab-delimited file describing the names, domains and descriptions of proteins in your network
... functional annotations:
a tab-delimited file containing all known functional terms of protiens in your network
Browse interactions in tabular form:
node1 | node2 | node1 accession | node2 accession | node1 annotation | node2 annotation | score |
FGFR1 | GDNF | ENSECAP00000047204 | ENSECAP00000037517 | Fibroblast growth factor receptor. | Glial cell derived neurotrophic factor. | 0.499 |
FGFR1 | GFRA3 | ENSECAP00000047204 | ENSECAP00000007373 | Fibroblast growth factor receptor. | GDNF family receptor alpha 3. | 0.515 |
FGFR1 | NRTN | ENSECAP00000047204 | ENSECAP00000030749 | Fibroblast growth factor receptor. | Neurturin. | 0.479 |
FGFR1 | PDGFRA | ENSECAP00000047204 | ENSECAP00000043405 | Fibroblast growth factor receptor. | Platelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. | 0.491 |
FGFRL1 | GDNF | ENSECAP00000034742 | ENSECAP00000037517 | Fibroblast growth factor receptor like 1. | Glial cell derived neurotrophic factor. | 0.430 |
FGFRL1 | GFRA3 | ENSECAP00000034742 | ENSECAP00000007373 | Fibroblast growth factor receptor like 1. | GDNF family receptor alpha 3. | 0.515 |
FGFRL1 | NRTN | ENSECAP00000034742 | ENSECAP00000030749 | Fibroblast growth factor receptor like 1. | Neurturin. | 0.479 |
FLT4 | GDNF | ENSECAP00000022789 | ENSECAP00000037517 | Fms related tyrosine kinase 4; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | Glial cell derived neurotrophic factor. | 0.518 |
FLT4 | GFRA3 | ENSECAP00000022789 | ENSECAP00000007373 | Fms related tyrosine kinase 4; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | GDNF family receptor alpha 3. | 0.522 |
GDNF | FGFR1 | ENSECAP00000037517 | ENSECAP00000047204 | Glial cell derived neurotrophic factor. | Fibroblast growth factor receptor. | 0.499 |
GDNF | FGFRL1 | ENSECAP00000037517 | ENSECAP00000034742 | Glial cell derived neurotrophic factor. | Fibroblast growth factor receptor like 1. | 0.430 |
GDNF | FLT4 | ENSECAP00000037517 | ENSECAP00000022789 | Glial cell derived neurotrophic factor. | Fms related tyrosine kinase 4; Belongs to the protein kinase superfamily. Tyr protein kinase family. CSF-1/PDGF receptor subfamily. | 0.518 |
GDNF | GFRA3 | ENSECAP00000037517 | ENSECAP00000007373 | Glial cell derived neurotrophic factor. | GDNF family receptor alpha 3. | 0.828 |
GDNF | NRTN | ENSECAP00000037517 | ENSECAP00000030749 | Glial cell derived neurotrophic factor. | Neurturin. | 0.711 |
GDNF | PDGFRA | ENSECAP00000037517 | ENSECAP00000043405 | Glial cell derived neurotrophic factor. | Platelet-derived growth factor receptor alpha; Tyrosine-protein kinase that acts as a cell-surface receptor for PDGFA, PDGFB and PDGFC and plays an essential role in the regulation of embryonic development, cell proliferation, survival and chemotaxis. Depending on the context, promotes or inhibits cell proliferation and cell migration. Plays an important role in the differentiation of bone marrow-derived mesenchymal stem cells. Required for normal skeleton development. | 0.481 |
GDNF | PSPN | ENSECAP00000037517 | ENSECAP00000001199 | Glial cell derived neurotrophic factor. | Persephin. | 0.552 |
GDNF | RET | ENSECAP00000037517 | ENSECAP00000002849 | Glial cell derived neurotrophic factor. | Proto-oncogene tyrosine-protein kinase receptor Ret; Receptor tyrosine-protein kinase involved in numerous cellular mechanisms including cell proliferation, neuronal navigation, cell migration, and cell differentiation upon binding with glial cell derived neurotrophic factor family ligands. | 0.952 |
GDNF | STIL | ENSECAP00000037517 | ENSECAP00000009170 | Glial cell derived neurotrophic factor. | STIL centriolar assembly protein. | 0.430 |
GFRA3 | FGFR1 | ENSECAP00000007373 | ENSECAP00000047204 | GDNF family receptor alpha 3. | Fibroblast growth factor receptor. | 0.515 |
GFRA3 | FGFRL1 | ENSECAP00000007373 | ENSECAP00000034742 | GDNF family receptor alpha 3. | Fibroblast growth factor receptor like 1. | 0.515 |
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