STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SCRG1Stimulator of chondrogenesis 1. (98 aa)    
Predicted Functional Partners:
ROPN1L
Rhophilin associated tail protein 1 like.
   
  
 0.774
SCG3
Secretogranin III.
   
  
 0.695
A2ML1
Alpha-2-macroglobulin like 1.
      
 0.672
EPYC
Epiphycan.
      
 0.672
XYLT1
Xylosyltransferase 1.
      
 0.633
MMP19
Matrix metallopeptidase 19.
      
 0.564
TBC1D30
TBC1 domain family member 30.
      
 0.556
CNMD
Chondromodulin.
   
  
 0.519
CRTAC1
Cartilage acidic protein 1.
   
  
 0.504
LHFPL2
LHFPL tetraspan subfamily member 2.
   
  
 0.503
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (26%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.