STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NRMNurim. (262 aa)    
Predicted Functional Partners:
LBR
Lamin B receptor.
   
  
 0.796
EMD
Emerin.
      
 0.706
C6orf136
Chromosome 6 open reading frame 136.
      
 0.695
SUN1
Sad1 and UNC84 domain containing 1.
    
 
 0.672
SUN2
Sad1 and UNC84 domain containing 2.
    
 
 0.596
TCF19
Transcription factor 19.
   
  
 0.591
GNL1
G protein nucleolar 1 (putative).
   
  
 0.572
KPNA4
Karyopherin subunit alpha 4.
      
 0.570
NDC1
NDC1 transmembrane nucleoporin.
   
  
 0.547
LOC106782180
Deoxyuridine triphosphatase.
   
  
 0.532
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.