STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
NEK8NIMA related kinase 8. (698 aa)    
Predicted Functional Partners:
ANKS3
Ankyrin repeat and sterile alpha motif domain containing 3.
   
 0.811
INVS
Inversin.
   
 0.810
NPHP1
Nephrocystin 1.
      
 0.763
ANKS6
Ankyrin repeat and sterile alpha motif domain containing 6.
   
 0.756
PKHD1
PKHD1 ciliary IPT domain containing fibrocystin/polyductin.
      
 0.745
NPHP4
Nephrocystin 4.
   
 
 0.673
OFD1
OFD1 centriole and centriolar satellite protein.
      
 0.664
CEP290
Centrosomal protein 290.
   
  
 0.661
ZNF423
Zinc finger protein 423.
     
 0.660
PKD1
Polycystin 1, transient receptor potential channel interacting.
   
  
 0.645
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.