STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SPARCL1SPARC like 1. (701 aa)    
Predicted Functional Partners:
LUM
Lumican.
   
  
 0.811
FAM20A
FAM20A golgi associated secretory pathway pseudokinase.
     
 0.703
CBLN2
Cerebellin 2 precursor.
   
 
 0.680
TECTB
Tectorin beta.
      
 0.655
DCN
Decorin; May affect the rate of fibrils formation; Belongs to the small leucine-rich proteoglycan (SLRP) family. SLRP class I subfamily.
   
  
 0.655
CBLN4
Cerebellin 4 precursor.
   
  
 0.651
ZCCHC24
Zinc finger CCHC-type containing 24.
      
 0.646
TECTA
Tectorin alpha.
   
 
 0.620
JAM2
Junctional adhesion molecule 2.
   
  
 0.606
OTOG
Otogelin.
   
 
 0.567
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.