STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LOC111769982BPI1 domain-containing protein. (229 aa)    
Predicted Functional Partners:
LBP
Lipopolysaccharide binding protein.
      
 0.695
MUC19
Uncharacterized protein.
      
 0.676
PLTP
Phospholipid transfer protein.
      
 0.676
SPINK5
Serine peptidase inhibitor, Kazal type 5.
      
 0.633
SFTPB
Surfactant protein B.
      
 0.563
BPIFB4
BPI fold containing family B member 4.
      
 0.537
SYT5
Synaptotagmin 5.
      
 0.471
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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