STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TRPT1tRNA phosphotransferase 1. (255 aa)    
Predicted Functional Partners:
THYN1
Thymocyte nuclear protein 1.
   
  
 0.833
NUDT22
Nudix hydrolase 22.
 
 
  
 0.813
MACROD1
Mono-ADP ribosylhydrolase 1.
  
  
 0.786
LOC102150439
Poly [ADP-ribose] polymerase.
  
  
 0.785
TFPT
TCF3 fusion partner.
   
  
 0.772
PARP3
Poly [ADP-ribose] polymerase.
   
  
 0.766
TPT1
Tumor protein, translationally-controlled 1; Belongs to the TCTP family.
   
  
 0.740
NUDT16
Nudix hydrolase 16.
   
  
 0.714
XPOT
Exportin-T; tRNA nucleus export receptor which facilitates tRNA translocation across the nuclear pore complex. Belongs to the exportin family.
   
  
 0.712
MACROD2
Mono-ADP ribosylhydrolase 2.
  
  
 0.712
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.