STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
SNAI2Snail family transcriptional repressor 2. (268 aa)    
Predicted Functional Partners:
TWIST1
Twist 1.
   
  
 0.911
TWIST2
Twist family bHLH transcription factor 2.
   
  
 0.770
CDH1
Cadherin 1; Cadherins are calcium-dependent cell adhesion proteins.
      
 0.738
VIM
Vimentin; Belongs to the intermediate filament family.
      
 0.712
CTNNB1
Beta catenin 1.
      
 0.708
TFAP2A
Transcription factor AP-2 alpha.
   
  
 0.707
CDH2
Cadherin 2; Cadherins are calcium-dependent cell adhesion proteins.
   
  
 0.694
SMAD2
Mothers against decapentaplegic homolog.
   
 
 0.694
KDM1A
Lysine demethylase 1A.
    
 0.686
MSX1
Msh homeobox 1.
   
  
 0.668
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.