STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
TMC8Transmembrane channel-like protein. (716 aa)    
Predicted Functional Partners:
KCNG4
Potassium voltage-gated channel modifier subfamily G member 4; Belongs to the potassium channel family.
    
 
 0.832
SYNGR2
Synaptogyrin.
 
 
  
 0.773
MYBPC1
Myosin binding protein C, slow type.
    
 0.665
SKIV2L
Ski2 like RNA helicase.
   
 
 0.594
WDR18
WD repeat domain 18.
   
 0.563
CPT2
Carnitine palmitoyltransferase 2; Belongs to the carnitine/choline acetyltransferase family.
    
 
 0.545
SH2D3A
SH2 domain containing 3A.
   
 0.539
SASH3
SAM and SH3 domain containing 3.
   
 
 0.538
TMC6
Transmembrane channel-like protein.
   
  
0.529
DCAF6
DDB1 and CUL4 associated factor 6.
      
 0.504
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
Server load: low (18%) [HD]
STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.