STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
LRP3LDL receptor related protein 3. (769 aa)    
Predicted Functional Partners:
ITSN2
Intersectin 2.
    
 0.615
HSPG2
Heparan sulfate proteoglycan 2.
    
0.609
GSK3B
Glycogen synthase kinase 3 beta; Belongs to the protein kinase superfamily.
    
 0.560
SORT1
Sortilin.
    
 
 0.523
RELN
Reelin.
    
 0.491
ERBB2
Receptor protein-tyrosine kinase.
   
 0.486
RHOU
Ras homolog family member U.
    
 0.482
RNF10
Ring finger protein 10.
      
 0.478
LRCH1
Leucine rich repeats and calponin homology domain containing 1.
    
 0.474
LDLRAP1
Low density lipoprotein receptor adaptor protein 1.
    
 0.463
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.