STRINGSTRING
STRING protein interaction network
Nodes:
Network nodes represent proteins
splice isoforms or post-translational modifications are collapsed, i.e. each node represents all the proteins produced by a single, protein-coding gene locus.
Node Color
colored nodes:
query proteins and first shell of interactors
white nodes:
second shell of interactors
Node Content
empty nodes:
proteins of unknown 3D structure
filled nodes:
a 3D structure is known or predicted
Edges:
Edges represent protein-protein associations
associations are meant to be specific and meaningful, i.e. proteins jointly contribute to a shared function; this does not necessarily mean they are physically binding to each other.
Known Interactions
from curated databases
experimentally determined
Predicted Interactions
gene neighborhood
gene fusions
gene co-occurrence
Others
textmining
co-expression
protein homology
Your Input:
Neighborhood
Gene Fusion
Cooccurrence
Coexpression
Experiments
Databases
Textmining
[Homology]
Score
CCDC59Coiled-coil domain containing 59. (250 aa)    
Predicted Functional Partners:
DMTF1
Cyclin D binding myb like transcription factor 1.
   
 
  0.856
LLPH
LLP homolog, long-term synaptic facilitation factor.
   
    0.806
ZNF296
Zinc finger protein 296.
      
 0.559
RBM42
RNA binding motif protein 42.
      
 0.539
LOC111771447
Uncharacterized protein.
   
  
 0.494
LOC100063485
Uncharacterized protein.
   
  
 0.494
CCDC85B
Coiled-coil domain containing 85B.
      
 0.483
MRPL55
Mitochondrial ribosomal protein L55.
   
  
 0.482
ARHGEF26
Rho guanine nucleotide exchange factor 26.
      
 0.481
ADCY9
Adenylate cyclase 9; Belongs to the adenylyl cyclase class-4/guanylyl cyclase family.
      
 0.443
Your Current Organism:
Equus caballus
NCBI taxonomy Id: 9796
Other names: E. caballus, Equus przewalskii f. caballus, Equus przewalskii forma caballus, domestic horse, equine, horse
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STRING is a Core Data Resource as designated by Global Biodata Coalition and ELIXIR.